Information for PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer (Motif 180)


Reverse Opposite:

p-value:0.000e+00
log p-value:-6.575e+03
Information Content per bp:1.702
Total Number of Sequences:50000.0
Total Number of Target Sequences:13792.0
Total Instances of Motif:4687.1
Total Instances of Motif in Targets:4050.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AGGTCTCTAACC
AGGTCTCTAACC

NRG1/NRG1_H2O2Hi/[](Harbison)/Yeast

Match Rank:2
Score:0.63
Offset:1
Orientation:forward strand
Alignment:AGGTCTCTAACC
-GGACCCT----

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:3
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCTCTAACC--
NTNNCGTATCCAAGTNN

PH0073.1_Hoxc9/Jaspar

Match Rank:4
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGTCTCTAACC--
GGAGGTCATTAATTAT

RTG3/Literature(Harbison)/Yeast

Match Rank:5
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGTCTCTAACC
-GGTCAC-----

FXR(NR/IR1)/Liver-FXR-ChIP-Seq(Chong et al.)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCTCTAACC-
NAGGTCANTGACCT

NRG1(MacIsaac)/Yeast

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AGGTCTCTAACC
-GGACCCT----

EcR/usp/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGTCTCTAACC--
GAGGTCATTGACCTC

SPT2/SPT2_YPD/[](Harbison)/Yeast

Match Rank:9
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-AGGTCTCTAACC
CCTGTCTCTAA--

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:forward strand
Alignment:AGGTCTCTAACC
AGGTCA------