Information for BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer (Motif 18)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.164e+03
Information Content per bp:1.751
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

BMAL1(HLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GNCACGTG
GNCACGTG

CLOCK(HLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GNCACGTG
GHCACGTG

MA0004.1_Arnt/Jaspar

Match Rank:3
Score:0.98
Offset:2
Orientation:reverse strand
Alignment:GNCACGTG
--CACGTG

bHLHE40(HLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.98
Offset:-1
Orientation:reverse strand
Alignment:-GNCACGTG-
NGKCACGTGM

PIF5ox(bHLH)/Arabidopsis-PIF5ox-ChIP-Seq(GSE35062)/Homer

Match Rank:5
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GNCACGTG---
-BCACGTGVDN

MA0568.1_MYC3/Jaspar

Match Rank:6
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GNCACGTG-
-GCACGTGC

MA0561.1_PIF4/Jaspar

Match Rank:7
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GNCACGTG
GCCACGTG

Max(HLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.97
Offset:0
Orientation:forward strand
Alignment:GNCACGTG----
ACCACGTGGTNN

USF1(HLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:9
Score:0.97
Offset:-1
Orientation:forward strand
Alignment:-GNCACGTG-
GGTCACGTGA

c-Myc(HLH)/LNCAP-cMyc-ChIP-Seq(unpublished)/Homer

Match Rank:10
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GNCACGTG
NCCACGTG