Information for PPARE(NR),DR1/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer (Motif 179)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.087e+03
Information Content per bp:1.631
Total Number of Sequences:50000.0
Total Number of Target Sequences:6530.0
Total Instances of Motif:7756.8
Total Instances of Motif in Targets:3908.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PPARE(NR/DR1)/3T3L1-Pparg-ChIP-Seq(GSE13511)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TGACCTTTGCCCCA
TGACCTTTGCCCCA

MA0065.2_PPARG::RXRA/Jaspar

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCCCCA-
TGACCTTTGCCCTAN

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:3
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCCCCA
TGACCTTTGCCCTA

TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:4
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCCCCA
TGACCTTTGACCTC

MA0504.1_NR2C2/Jaspar

Match Rank:5
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCCCCA-
TGACCTCTGACCCCN

MA0017.1_NR2F1/Jaspar

Match Rank:6
Score:0.83
Offset:0
Orientation:forward strand
Alignment:TGACCTTTGCCCCA
TGACCTTTGAACCT

MA0484.1_HNF4G/Jaspar

Match Rank:7
Score:0.82
Offset:0
Orientation:reverse strand
Alignment:TGACCTTTGCCCCA-
TGGACTTTGNNCTCN

MA0115.1_NR1H2::RXRA/Jaspar

Match Rank:8
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTTTGCCCCA-
GTTGACCTTTGACCTTT

MA0512.1_Rxra/Jaspar

Match Rank:9
Score:0.81
Offset:-2
Orientation:reverse strand
Alignment:--TGACCTTTGCCCCA
NCTGACCTTTG-----

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-TGACCTTTGCCCCA
CTGACCTTTG-----