Information for Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer (Motif 178)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.020e+04
Information Content per bp:1.598
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:TAATCCCN
TAATCCCN

MA0234.1_oc/Jaspar

Match Rank:2
Score:0.95
Offset:0
Orientation:forward strand
Alignment:TAATCCCN
TAATCC--

MA0212.1_bcd/Jaspar

Match Rank:3
Score:0.94
Offset:0
Orientation:forward strand
Alignment:TAATCCCN
TAATCC--

bcd/dmmpmm(Papatsenko)/fly

Match Rank:4
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--TAATCCCN
CCTAATCCC-

bcd-2/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-TAATCCCN
TTAATCC--

oc/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.93
Offset:-1
Orientation:forward strand
Alignment:-TAATCCCN
TTAATCC--

Oc/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.93
Offset:-3
Orientation:forward strand
Alignment:---TAATCCCN
NNTTAATCCN-

bcd/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.93
Offset:-4
Orientation:forward strand
Alignment:----TAATCCCN
CCNCTAATCCN-

Ptx1/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---TAATCCCN
NGTTAATCCC-

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.92
Offset:-2
Orientation:forward strand
Alignment:--TAATCCCN
GCTAATCC--