Information for PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer (Motif 174)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.943e+03
Information Content per bp:1.843
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GSCTGTCACTCA
GSCTGTCACTCA

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:GSCTGTCACTCA-
-NCTGTCAATCAN

MA0498.1_Meis1/Jaspar

Match Rank:3
Score:0.88
Offset:0
Orientation:forward strand
Alignment:GSCTGTCACTCA---
AGCTGTCACTCACCT

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.78
Offset:-4
Orientation:forward strand
Alignment:----GSCTGTCACTCA
AAGCACCTGTCAATAT

MA0207.1_achi/Jaspar

Match Rank:5
Score:0.77
Offset:2
Orientation:reverse strand
Alignment:GSCTGTCACTCA
--CTGTCA----

MA0227.1_hth/Jaspar

Match Rank:6
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GSCTGTCACTCA
--CTGTCA----

MA0252.1_vis/Jaspar

Match Rank:7
Score:0.75
Offset:2
Orientation:reverse strand
Alignment:GSCTGTCACTCA
--CTGTCA----

PH0105.1_Meis3/Jaspar

Match Rank:8
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GSCTGTCACTCA
AATTACCTGTCAATAC

PH0169.1_Tgif1/Jaspar

Match Rank:9
Score:0.74
Offset:-4
Orientation:reverse strand
Alignment:----GSCTGTCACTCA-
NNNCAGCTGTCAATATN

PH0140.1_Pknox1/Jaspar

Match Rank:10
Score:0.74
Offset:-4
Orientation:forward strand
Alignment:----GSCTGTCACTCA
AAAGACCTGTCAATCC