Information for PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer (Motif 167)


Reverse Opposite:

p-value:0.000e+00
log p-value:-2.456e+03
Information Content per bp:1.644
Total Number of Sequences:49998.3
Total Number of Target Sequences:7065.0
Total Instances of Motif:1176.9
Total Instances of Motif in Targets:1007.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

PAX3:FKHR-fusion(Paired/Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ACCGTGACTAATTNN
ACCGTGACTAATTNN

prd/dmmpmm(Noyes)/fly

Match Rank:2
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ACCGTGACTAATTNN
AGCGTGACGGATT--

br-Z4/dmmpmm(Pollard)/fly

Match Rank:3
Score:0.73
Offset:6
Orientation:forward strand
Alignment:ACCGTGACTAATTNN
------ACTAAT---

PH0132.1_Pax6/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:ACCGTGACTAATTNN-----
----TGATTAATTAATTGAC

MA0132.1_Pdx1/Jaspar

Match Rank:5
Score:0.69
Offset:7
Orientation:forward strand
Alignment:ACCGTGACTAATTNN
-------CTAATT--

LIN-39(Homeobox)/cElegans.L3-LIN39-ChIP-Seq(modEncode)/Homer

Match Rank:6
Score:0.69
Offset:3
Orientation:forward strand
Alignment:ACCGTGACTAATTNN
---ATGATTRATG--

MA0067.1_Pax2/Jaspar

Match Rank:7
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:ACCGTGACTAATTNN
-NCGTGACN------

YAP7(MacIsaac)/Yeast

Match Rank:8
Score:0.67
Offset:2
Orientation:forward strand
Alignment:ACCGTGACTAATTNN
--GCTTACTAAT---

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.66
Offset:4
Orientation:forward strand
Alignment:ACCGTGACTAATTNN-
----TGATTRATGGCY

GCN4(MacIsaac)/Yeast

Match Rank:10
Score:0.66
Offset:3
Orientation:forward strand
Alignment:ACCGTGACTAATTNN
---ATGACTCA----