Information for NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer (Motif 166)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.019e+04
Information Content per bp:1.689
Total Number of Sequences:50003.0
Total Number of Target Sequences:10349.0
Total Instances of Motif:10830.4
Total Instances of Motif in Targets:8612.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NGGGGATTTCCC
NGGGGATTTCCC

MF0003.1_REL_class/Jaspar

Match Rank:2
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NGGGGATTTCCC
-GGGGATTTCC-

MA0101.1_REL/Jaspar

Match Rank:3
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NGGGGATTTCCC
-GGGGATTTCC-

MA0107.1_RELA/Jaspar

Match Rank:4
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NGGGGATTTCCC
-GGGAATTTCC-

MA0105.3_NFKB1/Jaspar

Match Rank:5
Score:0.93
Offset:1
Orientation:forward strand
Alignment:NGGGGATTTCCC
-GGGAATTTCCC

MA0023.1_dl_2/Jaspar

Match Rank:6
Score:0.91
Offset:1
Orientation:forward strand
Alignment:NGGGGATTTCCC
-GGGGATTTCC-

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:7
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:NGGGGATTTCCC
-GGGAATTTCC-

dl/dmmpmm(Papatsenko)/fly

Match Rank:8
Score:0.90
Offset:2
Orientation:forward strand
Alignment:NGGGGATTTCCC
--GGGATTTCCC

shn-ZFP2/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.87
Offset:1
Orientation:forward strand
Alignment:NGGGGATTTCCC
-GGGGAATTCCC

dl/dmmpmm(Noyes)/fly

Match Rank:10
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:NGGGGATTTCCC--
--GGGTTTTCCCNG