Information for NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber et al.)/Homer (Motif 162)


Reverse Opposite:

p-value:2.274e-47
log p-value:-1.074e+02
Information Content per bp:1.733
Total Number of Sequences:7947.8
Total Number of Target Sequences:301.0
Total Instances of Motif:472.7
Total Instances of Motif in Targets:108.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/p50-ChIP-Chip(Schreiber et al.)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGGGGAATCCCC
GGGGGAATCCCC

dif/Rel/dmmpmm(Bergman)/fly

Match Rank:2
Score:0.92
Offset:1
Orientation:forward strand
Alignment:GGGGGAATCCCC
-GGGGAATCCCC

Rel/dmmpmm(Bergman)/fly

Match Rank:3
Score:0.88
Offset:1
Orientation:forward strand
Alignment:GGGGGAATCCCC
-GGGGAATCCCN

dl-B/dmmpmm(Bergman)/fly

Match Rank:4
Score:0.85
Offset:1
Orientation:reverse strand
Alignment:GGGGGAATCCCC
-GGGGAATTCCC

shn-ZFP2/dmmpmm(Bergman)/fly

Match Rank:5
Score:0.85
Offset:1
Orientation:forward strand
Alignment:GGGGGAATCCCC
-GGGGAATTCCC

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:6
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:GGGGGAATCCCC-
-GGGAAATCCCCN

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.84
Offset:2
Orientation:reverse strand
Alignment:GGGGGAATCCCC
--GGAAATCCCC

dl/dmmpmm(Noyes)/fly

Match Rank:8
Score:0.81
Offset:0
Orientation:forward strand
Alignment:GGGGGAATCCCC
CNGGGAAAACCC

MA0105.3_NFKB1/Jaspar

Match Rank:9
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:GGGGGAATCCCC
-GGGAAATTCCC

MA0023.1_dl_2/Jaspar

Match Rank:10
Score:0.79
Offset:2
Orientation:reverse strand
Alignment:GGGGGAATCCCC
--GGAAAACCCC