Information for Oct4:Sox17(POU,Homeobox,HMG)/F9-Sox17-ChIP-Seq(GSE44553)/Homer (Motif 159)


Reverse Opposite:

p-value:0.000e+00
log p-value:-7.893e+02
Information Content per bp:1.675
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4:Sox17/F9-Sox17-ChIP-Seq(GSE44553)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CCATTGTATGCAAAT
CCATTGTATGCAAAT

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.77
Offset:-3
Orientation:reverse strand
Alignment:---CCATTGTATGCAAAT
NNNCCATTGTGTNAN---

PH0145.1_Pou2f3/Jaspar

Match Rank:3
Score:0.74
Offset:3
Orientation:forward strand
Alignment:CCATTGTATGCAAAT----
---TTGTATGCAAATTAGA

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.72
Offset:3
Orientation:forward strand
Alignment:CCATTGTATGCAAAT----
---TTGTATGCAAATTAGA

MA0515.1_Sox6/Jaspar

Match Rank:5
Score:0.71
Offset:0
Orientation:forward strand
Alignment:CCATTGTATGCAAAT
CCATTGTTTT-----

MA0442.1_SOX10/Jaspar

Match Rank:6
Score:0.71
Offset:1
Orientation:forward strand
Alignment:CCATTGTATGCAAAT
-CTTTGT--------

MA0084.1_SRY/Jaspar

Match Rank:7
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:CCATTGTATGCAAAT
--ATTGTTTAN----

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:8
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCATTGTATGCAAAT
CCATTGTTNY-----

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:9
Score:0.70
Offset:0
Orientation:forward strand
Alignment:CCATTGTATGCAAAT
CCWTTGTY-------

slbo/dmmpmm(Down)/fly

Match Rank:10
Score:0.69
Offset:3
Orientation:forward strand
Alignment:CCATTGTATGCAAAT
---TTGATTGC----