Information for Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer (Motif 158)


Reverse Opposite:

p-value:0.000e+00
log p-value:-5.832e+03
Information Content per bp:1.809
Total Number of Sequences:55120.0
Total Number of Target Sequences:27560.0
Total Instances of Motif:7917.0
Total Instances of Motif in Targets:6798.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Oct4(POU/Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:ATTTGCATAA
ATTTGCATAA

MA0507.1_POU2F2/Jaspar

Match Rank:2
Score:0.98
Offset:-3
Orientation:forward strand
Alignment:---ATTTGCATAA
TTCATTTGCATAT

Oct2(POU/Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:3
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:ATTTGCATAA
ATTTGCATAT

PH0144.1_Pou2f2/Jaspar

Match Rank:4
Score:0.96
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATAA--
TNTAATTTGCATANNN

PH0145.1_Pou2f3/Jaspar

Match Rank:5
Score:0.96
Offset:-4
Orientation:reverse strand
Alignment:----ATTTGCATAA--
TNTAATTTGCATACNA

nub/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.95
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCATAA
CTNATTTGCATAT

MA0453.1_nub/Jaspar

Match Rank:7
Score:0.94
Offset:-3
Orientation:reverse strand
Alignment:---ATTTGCATAA
CTNATTTGCATA-

OCT4-SOX2-TCF-NANOG((POU/Homeobox/HMG)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.83
Offset:0
Orientation:forward strand
Alignment:ATTTGCATAA-----
ATTTGCATAACAATG

MA0142.1_Pou5f1::Sox2/Jaspar

Match Rank:9
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:ATTTGCATAA-----
ATTTGCATAACAAAG

AtLEC2(ABI3/VP1)/Arabidopsis thaliana/AthaMap

Match Rank:10
Score:0.77
Offset:1
Orientation:reverse strand
Alignment:ATTTGCATAA-
-TTTGCATGGA