Information for Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer (Motif 148)


Reverse Opposite:

p-value:8.547e-95
log p-value:-2.166e+02
Information Content per bp:1.660
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AAGCACTTAA
AAGCACTTAA

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:2
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AAGCACTTAA
AASCACTCAA

MA0122.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.86
Offset:1
Orientation:reverse strand
Alignment:AAGCACTTAA
-NCCACTTAN

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:4
Score:0.86
Offset:1
Orientation:forward strand
Alignment:AAGCACTTAA-
-RSCACTYRAG

PH0004.1_Nkx3-2/Jaspar

Match Rank:5
Score:0.85
Offset:-3
Orientation:forward strand
Alignment:---AAGCACTTAA----
CATAACCACTTAACAAC

bap/dmmpmm(Noyes_hd)/fly

Match Rank:6
Score:0.83
Offset:2
Orientation:reverse strand
Alignment:AAGCACTTAA--
--NCACTTAANN

MA0211.1_bap/Jaspar

Match Rank:7
Score:0.83
Offset:3
Orientation:reverse strand
Alignment:AAGCACTTAA
---CACTTAA

vnd/dmmpmm(Bergman)/fly

Match Rank:8
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-AAGCACTTAA---
NNNCCACTTNACAN

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:9
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---AAGCACTTAA----
CTTAACCACTTAAGGAT

PH0117.1_Nkx3-1/Jaspar

Match Rank:10
Score:0.82
Offset:-4
Orientation:forward strand
Alignment:----AAGCACTTAA---
TACTAAGTACTTAAATG