Information for Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer (Motif 147)


Reverse Opposite:

p-value:0.000e+00
log p-value:-4.609e+03
Information Content per bp:1.588
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:AASCACTCAA
AASCACTCAA

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:2
Score:0.97
Offset:1
Orientation:forward strand
Alignment:AASCACTCAA-
-RSCACTYRAG

MA0503.1_Nkx2-5_(var.2)/Jaspar

Match Rank:3
Score:0.92
Offset:0
Orientation:forward strand
Alignment:AASCACTCAA-
AGCCACTCAAG

MA0122.1_Nkx3-2/Jaspar

Match Rank:4
Score:0.89
Offset:1
Orientation:reverse strand
Alignment:AASCACTCAA
-NCCACTTAN

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:5
Score:0.88
Offset:0
Orientation:forward strand
Alignment:AASCACTCAA
AAGCACTTAA

z/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.88
Offset:3
Orientation:reverse strand
Alignment:AASCACTCAA
---CACTCAA

vnd/dmmpmm(Bergman)/fly

Match Rank:7
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-AASCACTCAA---
NNNCCACTTNACAN

z/dmmpmm(Down)/fly

Match Rank:8
Score:0.86
Offset:3
Orientation:reverse strand
Alignment:AASCACTCAA
---CACTCA-

MA0247.2_tin/Jaspar

Match Rank:9
Score:0.85
Offset:2
Orientation:reverse strand
Alignment:AASCACTCAA--
--CCACTTGANA

z/dmmpmm(Bigfoot)/fly

Match Rank:10
Score:0.85
Offset:3
Orientation:reverse strand
Alignment:AASCACTCAA
---CACTCA-