Information for NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer (Motif 144)


Reverse Opposite:

p-value:1.991e-42
log p-value:-9.602e+01
Information Content per bp:1.852
Total Number of Sequences:87190.0
Total Number of Target Sequences:1722.0
Total Instances of Motif:597.7
Total Instances of Motif in Targets:81.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/LPS-exp(GSE23622)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GGAAATTCCC
GGAAATTCCC

MA0107.1_RELA/Jaspar

Match Rank:2
Score:0.97
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAATTCCC

MA0105.3_NFKB1/Jaspar

Match Rank:3
Score:0.94
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTCCC
GGGAAATTCCC

MF0003.1_REL_class/Jaspar

Match Rank:4
Score:0.92
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAATCCCC

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:5
Score:0.91
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTCCC-
GGGAAATCCCCN

MA0101.1_REL/Jaspar

Match Rank:6
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAANCCCC

dl/dmmpmm(Papatsenko)/fly

Match Rank:7
Score:0.88
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGGAAATCCC

MA0023.1_dl_2/Jaspar

Match Rank:8
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAAACCCC

dl-A/dmmpmm(Bergman)/fly

Match Rank:9
Score:0.83
Offset:-1
Orientation:reverse strand
Alignment:-GGAAATTCCC
NGGAAAAACCC

dl/dmmpmm(Down)/fly

Match Rank:10
Score:0.83
Offset:0
Orientation:reverse strand
Alignment:GGAAATTCCC
GGAAAATCCA