Information for NF1:FOXA1(CTF,Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer (Motif 138)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.367e+03
Information Content per bp:1.682
Total Number of Sequences:50000.0
Total Number of Target Sequences:14301.0
Total Instances of Motif:949.6
Total Instances of Motif in Targets:809.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

NF1:FOXA1/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NNTGTTTATTTTGGCA
NNTGTTTATTTTGGCA

MA0047.2_Foxa2/Jaspar

Match Rank:2
Score:0.73
Offset:2
Orientation:forward strand
Alignment:NNTGTTTATTTTGGCA
--TGTTTACTTAGG--

MA0161.1_NFIC/Jaspar

Match Rank:3
Score:0.72
Offset:10
Orientation:forward strand
Alignment:NNTGTTTATTTTGGCA
----------TTGGCA

MF0005.1_Forkhead_class/Jaspar

Match Rank:4
Score:0.70
Offset:2
Orientation:forward strand
Alignment:NNTGTTTATTTTGGCA
--TGTTTATTT-----

MA0148.3_FOXA1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--NNTGTTTATTTTGGCA
TCCATGTTTACTTTG---

FOXA1(Forkhead)/LNCAP-FOXA1-ChIP-Seq(GSE27824)/Homer

Match Rank:6
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:NNTGTTTATTTTGGCA
--TGTTTACTTT----

FOXA1(Forkhead)/MCF7-FOXA1-ChIP-Seq(GSE26831)/Homer

Match Rank:7
Score:0.70
Offset:2
Orientation:reverse strand
Alignment:NNTGTTTATTTTGGCA
--TGTTTACTTT----

MA0546.1_PHA-4/Jaspar

Match Rank:8
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:NNTGTTTATTTTGGCA
--TGTTTACTTT----

Fox:Ebox(Forkhead:HLH)/Panc1-Foxa2-ChIP-Seq(GSE47459)/Homer

Match Rank:9
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:NNTGTTTATTTTGGCA-
NSTGTTTRCWCAGBNNN

MA0481.1_FOXP1/Jaspar

Match Rank:10
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-NNTGTTTATTTTGGCA
CTTTGTTTACTTTTN--