Information for Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer (Motif 121)


Reverse Opposite:

p-value:7.058e-137
log p-value:-3.135e+02
Information Content per bp:1.563
Total Number of Sequences:49999.0
Total Number of Target Sequences:2102.0
Total Instances of Motif:16051.2
Total Instances of Motif in Targets:1529.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NGCAATTAAA
NGCAATTAAA

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:2
Score:0.93
Offset:0
Orientation:forward strand
Alignment:NGCAATTAAA
NCYAATAAAA

CG34031/dmmpmm(Noyes_hd)/fly

Match Rank:3
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:NGCAATTAAA-
-NCAATTAAAN

PH0064.1_Hoxb9/Jaspar

Match Rank:4
Score:0.89
Offset:-2
Orientation:forward strand
Alignment:--NGCAATTAAA----
AGAGCCATAAAATTCG

cad/dmmpmm(Noyes_hd)/fly

Match Rank:5
Score:0.88
Offset:1
Orientation:reverse strand
Alignment:NGCAATTAAA-
-NTAATAAAAN

zen/dmmpmm(SeSiMCMC)/fly

Match Rank:6
Score:0.88
Offset:3
Orientation:reverse strand
Alignment:NGCAATTAAA
---CATTAAA

PH0056.1_Hoxa9/Jaspar

Match Rank:7
Score:0.88
Offset:-2
Orientation:forward strand
Alignment:--NGCAATTAAA-----
ACGGCCATAAAATTAAT

MA0216.2_CAD/Jaspar

Match Rank:8
Score:0.88
Offset:0
Orientation:forward strand
Alignment:NGCAATTAAA-
GGCCATAAAAA

Abd-B/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.87
Offset:1
Orientation:reverse strand
Alignment:NGCAATTAAA-
-NTCATAAAAC

MA0444.1_CG34031/Jaspar

Match Rank:10
Score:0.87
Offset:2
Orientation:reverse strand
Alignment:NGCAATTAAA
--CAATTAA-