Information for Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer (Motif 12)


Reverse Opposite:

p-value:0.000e+00
log p-value:-5.503e+03
Information Content per bp:1.657
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:VNAVCAGCTGGC
VNAVCAGCTGGC

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:2
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:VNAVCAGCTGGC
--AACAKATGGY

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:3
Score:0.92
Offset:2
Orientation:reverse strand
Alignment:VNAVCAGCTGGC
--AACAGATGGC

PL0006.1_hlh-2::lin-32/Jaspar

Match Rank:4
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-VNAVCAGCTGGC---
NNNAACAGCTGTTNNN

HLH-1(bHLH)/cElegans-Embryo-HLH1-ChIP-Seq(modEncode)/Homer

Match Rank:5
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:VNAVCAGCTGGC
DVAACAGCTGTY

SCL(HLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.90
Offset:2
Orientation:forward strand
Alignment:VNAVCAGCTGGC
--ANCAGCTG--

Ptf1a(HLH)/Panc1-Ptf1a-ChIP-Seq(GSE47459)/Homer

Match Rank:7
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:VNAVCAGCTGGC
-NAACAGCTGT-

Tcf12(HLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:8
Score:0.90
Offset:1
Orientation:reverse strand
Alignment:VNAVCAGCTGGC
-CAGCAGCTGN-

PL0010.1_hlh-2::hlh-19/Jaspar

Match Rank:9
Score:0.89
Offset:-1
Orientation:reverse strand
Alignment:-VNAVCAGCTGGC---
NNTNACAGCTGTTANN

MyoD(HLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:10
Score:0.89
Offset:0
Orientation:reverse strand
Alignment:VNAVCAGCTGGC
NNAGCAGCTGCT