Information for IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer (Motif 109)


Reverse Opposite:

p-value:0.000e+00
log p-value:-3.738e+03
Information Content per bp:1.781
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGT
GAAAGTGAAAGT

ISRE(IRF)/ThioMac-LPS-exp(GSE23622)/HOMER

Match Rank:2
Score:0.98
Offset:0
Orientation:reverse strand
Alignment:GAAAGTGAAAGT
GAAACTGAAACT

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:3
Score:0.96
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGT
GAAASYGAAASY

MA0050.2_IRF1/Jaspar

Match Rank:4
Score:0.93
Offset:-5
Orientation:reverse strand
Alignment:-----GAAAGTGAAAGT----
AAANNGAAAGTGAAAGTAAAN

Blimp-1/dmmpmm(Noyes)/fly

Match Rank:5
Score:0.92
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTGAAAGT
AANGAAAGTGAAAGT

MA0508.1_PRDM1/Jaspar

Match Rank:6
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGAAAGT--
AGAAAGTGAAAGTGA

MA0517.1_STAT2::STAT1/Jaspar

Match Rank:7
Score:0.90
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTGAAAGT--
GGAAANTGAAACTNA

MA0051.1_IRF2/Jaspar

Match Rank:8
Score:0.90
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTGAAAGT-----
GGAAAGCGAAACCAAAAC

PRDM1/BMI1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.90
Offset:0
Orientation:reverse strand
Alignment:GAAAGTGAAAGT
GAAAGTGAAAGT

MA0537.1_BLMP-1/Jaspar

Match Rank:10
Score:0.87
Offset:0
Orientation:forward strand
Alignment:GAAAGTGAAAGT
AAAAGTGAAAA-