Information for HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer (Motif 106)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.288e+04
Information Content per bp:1.686
Total Number of Sequences:0
Total Number of Target Sequences:0
Total Instances of Motif:0
Total Instances of Motif in Targets:0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:NCYAATAAAA
NCYAATAAAA

PH0078.1_Hoxd13/Jaspar

Match Rank:2
Score:0.95
Offset:-2
Orientation:forward strand
Alignment:--NCYAATAAAA----
CTACCAATAAAATTCT

PH0057.1_Hoxb13/Jaspar

Match Rank:3
Score:0.93
Offset:-2
Orientation:forward strand
Alignment:--NCYAATAAAA----
AACCCAATAAAATTCG

cad/dmmpmm(Noyes_hd)/fly

Match Rank:4
Score:0.93
Offset:1
Orientation:reverse strand
Alignment:NCYAATAAAA-
-NTAATAAAAN

Unknown(Homeobox)/Limb-p300-ChIP-Seq/Homer

Match Rank:5
Score:0.93
Offset:0
Orientation:forward strand
Alignment:NCYAATAAAA
NGCAATTAAA

abd-B/dmmpmm(Noyes)/fly

Match Rank:6
Score:0.93
Offset:2
Orientation:reverse strand
Alignment:NCYAATAAAA-
--TCATAAAAC

Abd-B/dmmpmm(Noyes_hd)/fly

Match Rank:7
Score:0.92
Offset:1
Orientation:reverse strand
Alignment:NCYAATAAAA-
-NTCATAAAAC

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:8
Score:0.92
Offset:1
Orientation:forward strand
Alignment:NCYAATAAAA-
-GTCATAAAAN

CG12361/dmmpmm(Noyes_hd)/fly

Match Rank:9
Score:0.91
Offset:1
Orientation:reverse strand
Alignment:NCYAATAAAA-
-GTAATAAAAN

MA0165.1_Abd-B/Jaspar

Match Rank:10
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:NCYAATAAAA
--TCATAAA-