Information for HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer (Motif 100)


Reverse Opposite:

p-value:0.000e+00
log p-value:-1.348e+04
Information Content per bp:1.603
Total Number of Sequences:52990.0
Total Number of Target Sequences:26495.0
Total Instances of Motif:11708.0
Total Instances of Motif in Targets:10770.0
Motif File:file (matrix)
reverse opposite
PDF Format Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR/DR1)/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:1.00
Offset:0
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
CANAGNNCAAAGTCCA

MA0484.1_HNF4G/Jaspar

Match Rank:2
Score:0.99
Offset:1
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
-AGAGTCCAAAGTCCA

MA0114.2_HNF4A/Jaspar

Match Rank:3
Score:0.99
Offset:2
Orientation:reverse strand
Alignment:CANAGNNCAAAGTCCA-
--NAGNNCAAAGTCCAN

MA0017.1_NR2F1/Jaspar

Match Rank:4
Score:0.91
Offset:2
Orientation:reverse strand
Alignment:CANAGNNCAAAGTCCA
--AGGTTCAAAGGTCA

TR4(NR/DR1)/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.83
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--GAGGTCAAAGGTCA

MA0512.1_Rxra/Jaspar

Match Rank:6
Score:0.81
Offset:7
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA--
-------CAAAGGTCAGA

RXR(NR/DR1)/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:7
Score:0.81
Offset:2
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
--TAGGGCAAAGGTCA

MA0504.1_NR2C2/Jaspar

Match Rank:8
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA
-AGGGGTCAGAGGTCA

PB0134.1_Hnf4a_2/Jaspar

Match Rank:9
Score:0.80
Offset:4
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA----
----GGCAAAAGTCCAATAA

MA0115.1_NR1H2::RXRA/Jaspar

Match Rank:10
Score:0.80
Offset:1
Orientation:forward strand
Alignment:CANAGNNCAAAGTCCA--
-AAAGGTCAAAGGTCAAC